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casertanucera_leukemia2023
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af7dea7f
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authored
Aug 04, 2023
by
Matteo Barcella
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**Whole Exome**
data analysis - from fastq data to variants calling and annotation
**Whole Exome**
data analysis - from fastq data to variants calling and annotation
As stated in supplementary methods we performed WES analysis relying mostly on the GATK best practices for WES analysis.
As stated in supplementary methods we performed WES analysis relying mostly on the GATK best practices for WES analysis.
Raw fastq data are available at
the folling ENA
repository.
Raw fastq data are available at
[
PRJEB63520
](
https://www.ebi.ac.uk/ena/browser/view/PRJEB63520
)
repository.
Below the main steps performed and the relative running commands:
Below the main steps performed and the relative running commands:
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