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DellaVolpe_GeneEditing
DellaVolpe_scRNA-seq
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24e414c7
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24e414c7
authored
Oct 14, 2024
by
Teresa Tavella
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# DellaVolpe_scRNA-seq
# DellaVolpe_scRNA-seq
<details>
<summary
markdown=
"span"
><strong>
Cellranger (v 6.1.1)
</strong></summary>
-
cellranger count --localcores x --id=${sample}_counts --libraries ${libcsv} --feature-ref ${featcsv} --transcriptome=${ref}
</details>
<details>
<summary
markdown=
"span"
><strong>
Cell and feature filtering and HTO demultiplexing
</strong></summary>
-
HTO_demux.R
</details>
<details>
<summary
markdown=
"span"
><strong>
Check for gender bias
</strong></summary>
-
Check_donor_bias.pdf
</details>
<details>
<summary
markdown=
"span"
><strong>
Paper Figures
</strong></summary>
-
scRNAseq_paper_figures.pdf
</details>
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