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Squadrito_LiverTumor2022
Squadrito_LiverTumor2022_Spatial
Commits
a3eba23a
Commit
a3eba23a
authored
Jul 25, 2023
by
Stefano Beretta
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Update README.md
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@@ -15,10 +15,10 @@ GEO: [GSE221359](https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE221359)
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`1_GSEA_Visualization.R`
: analysis on zones with GSEA;
-
`2_SigZones_Visualization.R`
: in depth characterization of zones with signatures.
-
data: results of the analyses
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GSEA_Zones_unique_integrated.res01.txt;
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Zones_unique.integrated.txt;
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crc.integrated_metadata.csv.gz;
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miDB_sig3.rds.
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GSEA_Zones_unique_integrated.res01.txt
: GSEA results
;
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Zones_unique.integrated.txt
: results of zonation
;
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crc.integrated_metadata.csv.gz
: metadata of the final object
;
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miDB_sig3.rds
: signatures for GSEA from MSigDB
.
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